한국 들잔디로부터 chitinase 유전자들의 클로닝 및 특성분석
- Abstract
- Zoysiagrass (Zoysia japonica Steud.) is the most significant cultivar used in golf courses, athletic fields, commercially. But it is very suffering damage by large patch disease causing Rhizoctonia solani AG-2-2 (IV), and having physical and economical loss for biocontrol of this disease.
In this study, two full-length chitinase genes that widely known as PR-protein were isolated from zoysiagrass. Further, structural property and expression analysis of these genes was carried out. Consequently, isolated two chitinases classified into class I (Zjchi1) and class II (Zjchi2), in a result of expression analysis showed higher expression in roots than in blade. For functional analysis, two chitinases were overexpressed in E. coli and purified using GST-affinity column chromatography.
In chitinolytic activity test using 4MU-(GlcNAc), two purified recombinant chitinases showed chitin hydrolysis activity for 4-Methylumbelliferyl N,N'- diacetylchitobioside hydrate, 4-Methylumbelliferyl N-acetyl-β-D-glucosaminide, and 4-Methylumbelliferyl β-D-N,N',N''-triacetylchitotriose, respectively. Also, antifungal activity against various fungi causing diseases of zoysiagrass and most important crops was investigated in the purified recombinant chitinases. Zjchi2 of the purified recombinant chitinases indicated growth inhibition of mycelia from Rhizoctonia cerealis, Fusarium culmorum, Fusarium graminearum, Trichoderma reesei, whereas not showed antifungal activity from Rhizoctonia solani AG-2-2 (IV), Rhizoctonia solani AG-1 (IA), Sclerotinia minor, Sclerotinia sclerotiorum, Neurospora crassa, Phytophthora capsici, respectively.
Although both of the purified recombinant chitinases not showed antifungal activity against Rhizoctonia solani AG-2-2 (IV) causing large patch disease of zoysiagrass, this is the first study for characterization of chitinase genes isolated from zoysiagrass.
- Author(s)
- 강지남
- Issued Date
- 2013
- Awarded Date
- 2013. 2
- Type
- Dissertation
- URI
- http://dcoll.jejunu.ac.kr/jsp/common/DcLoOrgPer.jsp?sItemId=000000006315
- Affiliation
- 제주대학교 대학원
- Department
- 대학원 생명공학과
- Advisor
- 이효연
- Table Of Contents
- I. 서론
II. 재료 및 방법
1. 식물 및 fungi 재료
2. Total RNA의 추출
3. 염색체 DNA의 추출
4. Chitinase 유전자의 cloning
5. Full-length chitinase의 phylogenetic tree 분석
6. Chitinase 유전자의 기관별 발현 분석
7. GST-chitinase fusion vector의 제작
8. E. coli를 이용한 재조합 (r) chitinase의 과발현 및 정제
9. 4MU-(GlcNAc) 기질에 대한 r-chitinase의 chitinolytic 활성 분석
10. 디스크 방산법을 이용한 r-chitinase의 균사신장 억제 분석
11. 병원성 fungi의 균사성장에서 r-chitinase의 농도별 영향 분석
12. r-chitinase에 의하여 성장이 억제된 병원성 fungi의 현미경 분석
III. 결과 및 고찰
1. Chitinase 유전자의 cloning
1.1. Chitinase 유전자의 단편분리를 위한 primer 제작 및 RT-PCR
1.2. Full-length chitinase 유전자의 cloning
2. Chitinase의 구조적 특성 및 발현 분석
2.1. Chitinase의 구조적 특성 분석
2.2. Chitinase의 phylogenetic tree 분석
2.3. Chitinase 유전자의 기관별 발현 분석
3. E. coli를 이용한 chitinase의 과발현 및 정제
4. Chitinolytic 및 항균 활성 분석
4.1. r-chitinase의 chitinolytic 활성 분석
4.2. r-chitinase의 균사신장 억제 분석
4.3. r-chitinase 농도에 따른 균사성장 억제 분석
4.4. r-chitinase에 의하여 성장이 억제된 병원성 fungi의 현미경 분석
IV. 종합고찰
V. 결론
VI. 참고문헌
- Degree
- Master
- Publisher
- 제주대학교
- Citation
- 강지남. (2013). 한국 들잔디로부터 chitinase 유전자들의 클로닝 및 특성분석
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